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Ok, so how do you upgrade base packages?
We effectively had a filesystem image that got synced to a master machine, new rpms were installed and the new image was then snapshotted.
The new golden image can then be pushed to test machines, pass regression tests, and then pushed to a test colo, eventually with some live traffic.
When the new image has seen enough testing, it is pushed slowly to the entire fleet.
Normally, 2 images: the current/old one and the new one.